[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 5,012 items for (author: wang & q)

EMDB-36776:
The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric apo state
Method: single particle / : Zhu HZ, Liu JJG

EMDB-36777:
The Anoxybacillus pushchinoensis ORF-less Group IIC Intron DR1 at symmetric pre-cleavage state
Method: single particle / : Zhu HZ, Liu JJG

EMDB-36778:
The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric post cleavge state
Method: single particle / : Zhu HZ, Liu JJG

EMDB-36786:
The Streptococcus azizii ORF-less Group IIC intron HYER2 at apo state
Method: single particle / : Zhu HZ, Liu JJG

PDB-8k0p:
The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric apo state
Method: single particle / : Zhu HZ, Liu JJG

PDB-8k0q:
The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric pre-cleavage state
Method: single particle / : Zhu HZ, Liu JJG

PDB-8k0r:
The Anoxybacillus pushchinoensis ORF-less Group IIC Intron HYER1 at symmetric post cleavge state
Method: single particle / : Zhu HZ, Liu JJG

PDB-8k15:
The Streptococcus azizii ORF-less Group IIC intron HYER2 at apo state
Method: single particle / : Zhu HZ, Liu JJG

EMDB-39724:
A homotrimeric GPCR architecture of the human cytomegalovirus (UL78) revealed by cryo-EM
Method: single particle / : Chen Y, Li Y, Zhou Q, Cong Z, Lin S, Yan J, Chen X, Yang D, Ying T, Wang MW

PDB-8z1e:
A homotrimeric GPCR architecture of the human cytomegalovirus (UL78) revealed by cryo-EM
Method: single particle / : Chen Y, Li Y, Zhou Q, Cong Z, Lin S, Yan J, Chen X, Yang D, Ying T, Wang MW

EMDB-39916:
SARS-CoV-2 Omicron BA.1 spike trimer (x2-4P) in complex with 3 D1F6 Fabs (0 RBD up)
Method: single particle / : Liu B, Gao X, Li Z, Chen Q, He J, Xiong X

EMDB-39917:
SARS-CoV-2 Omicron BA.2 spike trimer (6P) in complex with 3 D1F6 Fabs (1 RBD up)
Method: single particle / : Liu B, Gao X, Li Z, Chen Q, He J, Xiong X

EMDB-39918:
SARS-CoV-2 Omicron BA.2 spike trimer (6P) in complex with 3 D1F6 Fabs (2 RBD up)
Method: single particle / : Liu B, Gao X, Li Z, Chen Q, He J, Xiong X

EMDB-39919:
SARS-CoV-2 Omicron BA.2 spike trimer (6P) in complex with D1F6 Fab, focused refinement of RBD region
Method: single particle / : Liu B, Gao X, Li Z, Chen Q, He J, Xiong X

EMDB-39921:
SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with 3 D1F6 Fabs (1 RBD up)
Method: single particle / : Liu B, Gao X, Li Z, Chen Q, He J, Xiong X

EMDB-39922:
SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with 3 D1F6 Fabs (2 RBD up)
Method: single particle / : Liu B, Gao X, Li Z, Chen Q, He J, Xiong X

EMDB-39923:
SARS-CoV-2 Omicron BA.4 spike trimer (6P) in complex with D1F6 Fab, focused refinement of RBD region
Method: single particle / : Liu B, Gao X, Li Z, Chen Q, He J, Xiong X

EMDB-42383:
Cryo-EM map of the human CTF18-RFC-PCNA binary complex in the three-subunit binding state (state 2)
Method: single particle / : Wang F, He Q, Li H

EMDB-42384:
Cryo-EM map of the human CTF18-RFC-PCNA binary complex in the four-subunit binding state (state 3)
Method: single particle / : Wang F, He Q, Li H

EMDB-42385:
Cryo-EM map of the human CTF18-RFC-PCNA-DNA ternary complex with narrow PCNA opening state I (state 5)
Method: single particle / : Wang F, He Q, Li H

EMDB-42386:
Cryo-EM map of the human CTF18-RFC-PCNA-DNA ternary complex in the five-subunit binding state (state 4)
Method: single particle / : Wang F, He Q, Li H

EMDB-42388:
Cryo-EM map of the human CTF18-RFC-PCNA-DNA ternary complex with narrow PCNA opening state II (state 6)
Method: single particle / : Wang F, He Q, Li H

EMDB-42389:
Cryo-EM map of the human CTF18-RFC-PCNA-DNA ternary complex with cracked and closed PCNA (state 7)
Method: single particle / : Wang F, He Q, Li H

EMDB-42406:
Cryo-EM map of the human CTF18-RFC alone in the apo state (State 1)
Method: single particle / : Wang F, He Q, Li H

PDB-8umt:
Atomic model of the human CTF18-RFC-PCNA binary complex in the three-subunit binding state (state 2)
Method: single particle / : Wang F, He Q, Li H

PDB-8umu:
Atomic model of the human CTF18-RFC-PCNA binary complex in the four-subunit binding state (state 3)
Method: single particle / : Wang F, He Q, Li H

PDB-8umv:
Atomic model of the human CTF18-RFC-PCNA-DNA ternary complex with narrow PCNA opening state I (state 5)
Method: single particle / : Wang F, He Q, Li H

PDB-8umw:
Atomic model of the human CTF18-RFC-PCNA-DNA ternary complex in the five-subunit binding state (state 4)
Method: single particle / : Wang F, He Q, Li H

PDB-8umy:
Atomic model of the human CTF18-RFC-PCNA-DNA ternary complex with narrow PCNA opening state II (state 6)
Method: single particle / : Wang F, He Q, Li H

PDB-8un0:
Atomic model of the human CTF18-RFC-PCNA-DNA ternary complex with cracked and closed PCNA (state 7)
Method: single particle / : Wang F, He Q, Li H

PDB-8unj:
Atomic model of the human CTF18-RFC alone in the apo state (State 1)
Method: single particle / : Wang F, He Q, Li H

EMDB-41639:
Langya henipavirus fusion protein in postfusion state
Method: single particle / : Wang Z, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-41640:
Langya henipavirus fusion protein in prefusion state
Method: single particle / : Wang Z, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-41641:
Langya henipavirus postfusion F protein in complex with the 4G5 Fab, local refinement of the viral membrane distal region
Method: single particle / : Wang Z, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-41642:
Langya henipavirus postfusion F protein in complex with 4G5 Fab, local refinement of the viral membrane proximal region
Method: single particle / : Wang Z, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-41644:
Langya henipavirus postfusion fusion protein in complex with 4G5 Fab (global refinement)
Method: single particle / : Wang Z, Veesler D

PDB-8tve:
Langya henipavirus fusion protein in postfusion state
Method: single particle / : Wang Z, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8tvf:
Langya henipavirus fusion protein in prefusion state
Method: single particle / : Wang Z, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8tvg:
Langya henipavirus postfusion F protein in complex with the 4G5 Fab, local refinement of the viral membrane distal region
Method: single particle / : Wang Z, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8tvh:
Langya henipavirus postfusion F protein in complex with 4G5 Fab, local refinement of the viral membrane proximal region
Method: single particle / : Wang Z, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-41636:
Ghanaian virus fusion glycoprotein (GhV F)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

EMDB-41643:
Langya Virus G glycoprotein (LayV G) with stabilizing mutations
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-43593:
Langya Virus attachment (G) glycoprotein with K85L/L86K mutation
Method: single particle / : Gibson CG, McCallum MM, Veesler DV

PDB-8tvb:
Ghanaian virus fusion glycoprotein (GhV F)
Method: single particle / : Park YJ, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler D

PDB-8tvi:
Langya Virus G glycoprotein (LayV G) with stabilizing mutations
Method: single particle / : McCallum M, Veesler D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

PDB-8vwp:
Langya Virus attachment (G) glycoprotein with K85L/L86K mutation
Method: single particle / : Gibson CG, McCallum MM, Veesler DV, Seattle Structural Genomics Center for Infectious Disease (SSGCID)

EMDB-36980:
Cryo-EM structure of DSR2-TTP
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-36982:
Cryo-EM structure of DSR2-DSAD1 state 2
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-37272:
Cryo-EM structure of DSR2-DSAD1 state 1
Method: single particle / : Zhang H, Li Z, Li XZ

EMDB-37603:
Cryo-EM structure of DSR2-DSAD1
Method: single particle / : Zhang H, Li Z, Li XZ

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more